Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904419.1_cds_XP_016454568.1_48580
CDS Infomation

[gene=LOC107778777] [db_xref=GeneID:107778777] [protein=protein HESO1-like] [protein_id=XP_016454568.1] [location=join(16521..16659,17143..17307,21185..21360,21439..21534,22233..22302,30929..31059,31212..31322,31520..32158)] [gbkey=CDS]
Sequence

ATGAATGGCTACAGCTCGTTGGAGCATACTCTTCGGAATATACTTTGCGCTATCAATCCG
TTGGATGAGGATTGGTCTATGAGATTTCAACTCATTGATGAACTTCGAGCCATGGTTGAA
AACATAGAAAGCCTGAGAGGGGCAACTGTAGAGCCATTTGGATCTTTTGTGTCAAATCTT
TTTACAAGATGGGGAGATCTTGATATTTCCATAGAGGTTCCCAATGGATCATATATCTCA
TCTGCTGGGAAGAAGTACAAACTAAGTCTACTAGAGGATGTACGAAAAGCTCTGAGAGCT
AAAGGTGGATGCCAAAAGCTGCAATTTATTACCAATGCAAGAGTCCCAATCTTGAAGTTT
CACGGAAATTACAATATTTCTTGTGATATATCAATCAATAATTTGAGCGGCCAAATGAAG
TCCAAAATATTATACTGGATCAACATGATTGATGGAAGATTTCGTGATATGGTTTTACTG
GCGAAAGAATGGGCTAAGGCACATAATATCAATGATTCGAAGGCTGGAACTTTGAACTCA
TATTCTCTCAGCTTGTTAGTTGTGTTCCACTTTCAGACATGTGTACCTGCAATTTTACCA
CCTCTTAAAGAAATATATCCAGGAAATATGGTTGATGATCTTACAGGTGTTAGGGCTAGT
GCTGAGAAGTTCATTGAAGAAACATGTGCTACAAATATAAATCAACTTATGTCAAAAAAG
TCACGAGCGTTTAATAAGAGTTCTTTGTCTGAGCTTTTCATCTCATTCATTGCAAAGTTC
TGCGACATCAGCTCAAAAGCCTCTGCTCAAGGAATTAGCACATTCACTGGCCAGTGGGAA
GACATTGAGGGCAACATGAGATGGCTGCCTAAGACATACACAATATTTGTTGAGGATCCC
TTTGAGCAGCCAGTTAATGCAGCGAGGGGTGTAAGCAGTAAACAACTAACAAGAATAGAA
GAAGTATTCAGGAGGACCCACTTTATGCTTATTTCTTCGAATCAAAATCAGAATGAAGTT
ATTTCTACTCTTGTTAAGCCACATGTATCAAAGTCTGTGGCAAGAACTCCTACTGGAAAC
CAAAATAACTACAGTAGAAATGGCCTTAGGCCGCAAGTGCAGGCGCAGAGAGCTATAAAG
CCACCACGACAAGTACAACATCAGCTTCAGGCACAGAGAGCTATACCGCCACCGATGCGA
GCACAACATCAGCTTCATGCACAGAGAGCTGTACAGCCACCAATCCAAGCAGCACAGAGA
ACTGTACAGACACCAATCCAAGCAGCACAGAGAACTATACAGCCACCTATCCAAGCACCA
CATCAGCTTCAGGGACAGAGAACTATGCAGCCACCTATCCAAGCACCACATCAGCTTCAG
GGACAGAGACCCATATATCCACCATTTCAAGCACATCGGCTTCAGGACAAAAGGTTGGAC
AGGAATCAGAATTCGTCGGCGCAGAGACCCACCCAGGCTAATCGTGTTCAAACACAGCCA
ATATGGAGGCCAAAATCTGACAGATAG

Peptide Sequence

PEP ID

XP_016454568.1
PEP Infomation

PREDICTED: protein HESO1-like [Nicotiana tabacum]
Sequence

MNGYSSLEHTLRNILCAINPLDEDWSMRFQLIDELRAMVENIESLRGATVEPFGSFVSNL
FTRWGDLDISIEVPNGSYISSAGKKYKLSLLEDVRKALRAKGGCQKLQFITNARVPILKF
HGNYNISCDISINNLSGQMKSKILYWINMIDGRFRDMVLLAKEWAKAHNINDSKAGTLNS
YSLSLLVVFHFQTCVPAILPPLKEIYPGNMVDDLTGVRASAEKFIEETCATNINQLMSKK
SRAFNKSSLSELFISFIAKFCDISSKASAQGISTFTGQWEDIEGNMRWLPKTYTIFVEDP
FEQPVNAARGVSSKQLTRIEEVFRRTHFMLISSNQNQNEVISTLVKPHVSKSVARTPTGN
QNNYSRNGLRPQVQAQRAIKPPRQVQHQLQAQRAIPPPMRAQHQLHAQRAVQPPIQAAQR
TVQTPIQAAQRTIQPPIQAPHQLQGQRTMQPPIQAPHQLQGQRPIYPPFQAHRLQDKRLD
RNQNSSAQRPTQANRVQTQPIWRPKSDR

Transcript Sequence

Gene sequence data has not been registered.